Page Not Found
Page not found. Your pixels are in another canvas.
A list of all the posts and pages found on the site. For you robots out there is an XML version available for digesting as well.
Page not found. Your pixels are in another canvas.
This is a page not in th emain menu
Published:
This post will show up by default. To disable scheduling of future posts, edit config.yml
and set future: false
.
Published:
This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
Published:
This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
Published:
This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
Published:
This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
Published in Research in Microbiology, 2018
Recommended citation: Gupta S, Lemenze A, Donnelly RJ, Connell ND, Kadouri DE. Res Microbiol. Keeping it together: absence of genetic variation and DNA incorporation by the predatory bacteria Micavibrio aeruginosavorus and Bdellovibrio bacteriovorus during predation. https://www.ncbi.nlm.nih.gov/pubmed/29751066
Published in RNA Biology, 2019
Recommended citation: Iacona JR, Monteleone NJ, Lemenze AD, Cornett AL, Lutz CS. Transcriptomic studies provide insights into the tumor suppressive role of miR-146a-5p in non-small cell lung cancer (NSCLC) cells. RNA Biol. 2019 Dec;16(12):1721-1732. doi: 10.1080/15476286.2019.1657351. Epub 2019 Aug 23. https://www.ncbi.nlm.nih.gov/pubmed/31425002
Published in ACS Infectious Disease, 2019
Recommended citation: Wang X, Perryman AL, Li SG, Paget SD, Stratton TP, Lemenze A, Olson AJ, Ekins S, Kumar P, Freundlich JS. Intrabacterial Metabolism Obscures the Successful Prediction of an InhA Inhibitor of Mycobacterium tuberculosis. ACS Infect Dis. 2019 Dec 13;5(12):2148-2163. doi: 10.1021/acsinfecdis.9b00295. Epub 2019 Nov 5 https://www.ncbi.nlm.nih.gov/pubmed/31625383
Published in Restoration Ecology, 2019
Recommended citation: Eaton, W.D., McGee, K.M., Donnelly, R.H., Lemenze, A., Karas, O., & Hajibabaei, M. (2019). Differences in the soil microbial community and carbon‐use efficiency following development of Vochysia guatemalensis tree plantations in unproductive pastures in Costa Rica. https://onlinelibrary.wiley.com/doi/abs/10.1111/rec.12978
Published in PLoS Pathogens, 2020
Recommended citation: Inclan-Rico J.M., Hernandez C.M., Henry E.K., Federman H.G., Sy C.B., Ponessa J.J., Lemenze A.D., Joseph N., Soteropoulos P., Beaulieu A.M., Yap G.S., & Siracusa M.C. Trichinella spiralis-induced mastocytosis and erythropoiesis are simultaneously supported by a bipotent mast cell/erythrocyte precursor cell. PLoS Pathog. 2020;16(5):e1008579. Published 2020 May 18. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7259795/
Published in Nature Immunology, 2020
Recommended citation: Inclan-Rico J.M, Ponessa J.J, Valero-Pacheco N, Hernandez C, Sy C.B, Lemenze A.D, Beaulieu A.M, Siracusa M.C. Basophils prime group 2 innate lymphoid cells for neuropeptide-mediated inhibition. Nat Immunol (2020). https://doi.org/10.1038/s41590-020-0753-y Published 2020 August 17. https://www.nature.com/articles/s41590-020-0753-y#citeas
Published in Fertility and Sterility, 2020
Recommended citation: Perlman BE, Merriam A, Lemenze AD, Begum S, Zhao Q, Shawber CJ, Douglas NC. Hypoxia Induces Trophoblast Migration and Invasion Gene Pathways a Subset of which are Reduced in Preeclampsia CVS. Fertility and Sterility. 2020;114(3):E339-E340. Published 2020 Sept 01. https://www.fertstert.org/article/S0015-0282(20)31771-4/fulltext
Published in Transplantation and Tissue Engineering, 2020
Recommended citation: Panayotova G, Lemenze AD, Minze LJ, Aware N, Nguyen CT, Graviss EA, Ghobrial M, Guarrera JV, Lunsford KE. HDysregulation of Wnt Canonical Signaling Portends Pre-Transplant Immune Dysfunction and Post-Transplant Morbidity and Mortality in Liver Transplant Recipients. Transplantation and Tissue Engineering. 2020;231(34):E221. Published 2020 Oct 01. https://www.journalacs.org/article/S1072-7515(20)31918-9/fulltext
Published in bioRxiv, 2020
Recommended citation: Fei Chen, Darine W. El Naccache, John Ponessa, Alexander Lemenze, Vanessa Espinosa, Wenhui Wu, Katherine Lothstein, Linhua Jin, Amariliz Rivera, Mark Siracusa, William C. Gause. Monocyte-derived alveolar macrophages mediate resistance to migrating helminths through depletion of arginine availability. bioRxiv 2020.10.02.322388; doi: https://doi.org/10.1101/2020.10.02.322388 https://www.biorxiv.org/content/10.1101/2020.10.02.322388v1
Published in Journal of Biological Chemistry, 2020
Recommended citation: Yin T, Yao W, Lemenze AD, D'Adamio L. Danish and British dementia ITM2b/BRI2 mutations reduce BRI2 protein stability and impair glutamatergic synaptic transmission. J Biol Chem. 2020 Nov 10:jbc.RA120.015679. doi: 10.1074/jbc.RA120.015679 https://www.jbc.org/content/early/2020/11/10/jbc.RA120.015679.long
Published in Soil Systems, 2020
Recommended citation: Eaton, W.D.; McGee, K.M.; Hoke, E.; Lemenze, A.; Hajibabaei, M. Influence of Two Important Leguminous Trees on Their Soil Microbiomes and Nitrogen Cycle Activities in a Primary and Recovering Secondary Forest in the Northern Zone of Costa Rica. Soil Syst. 2020, 4, 65. https://www.mdpi.com/2571-8789/4/4/65
Published in Arthritis and Rheumatology, 2021
Recommended citation: Dong X, Antao OQ, Song W, Sanchez GM, Zembrzuski K, Koumpouras F, Lemenze A, Craft J, Weinstein JS. Type I Interferon-Activated STAT4 Regulation of Follicular Helper T Cell-Dependent Cytokine and Immunoglobulin Production in Lupus. Arthritis Rheumatol. 2021 Mar;73(3):478-489. doi: 10.1002/art.41532. Epub 2021 Jan 29. PMID: 33512094; PMCID: PMC7914134. https://onlinelibrary.wiley.com/doi/10.1002/art.41532
Published in Applied Soil Ecology, 2021
Recommended citation: Eaton WD, McGee KM, Donnelly R, Lemenze A, Larimer M, Hajibabaei M. The impacts of a logging road on the soil microbial communities, and carbon and nitrogen components in a Northern Zone Costa Rican forest. Applied Soil Ecology, Volume 164, 2021, 103937, ISSN 0929-1393, https://doi.org/10.1016/j.apsoil.2021.103937. https://www.sciencedirect.com/science/article/pii/S0929139321000585
Published in Reproduction, 2021
Recommended citation: Perlman BE, Merriam AA, Lemenze A, Zhao Q, Begum S, Nair M, Wu T, Wapner RJ, Kitajewski JK, Shawber CJ, Douglas NC. Implications for Preeclampsia: Hypoxia-Induced Notch Promotes Trophoblast Migration. Reproduction. 2021 Mar 1:REP-20-0483.R1. doi: 10.1530/REP-20-0483. Epub ahead of print. PMID: 33784241. https://pubmed.ncbi.nlm.nih.gov/33784241/
Published in Immunity, 2021
Recommended citation: Song, Wenzhi and Antao, Olivia Q. and Condiff, Emily and Sanchez, Gina M. and Chernova, Irene and Zembrzuski, Krzysztof and Steach, Holly and Rubtsova, Kira and Lemenze, Alexander and Laidlaw, Brian J. and Craft, Joseph and Weinstein, Jason, Development of Tbet- and CD11c-Expressing B Cells in a Viral Infection Requires T Follicular Helper Cells Outside of Germinal Centers. Available at SSRN: https://ssrn.com/abstract=3825161 or http://dx.doi.org/10.2139/ssrn.3825161 https://papers.ssrn.com/sol3/papers.cfm?abstract_id=3825161
Published in Journal of the Endocrine Society, 2021
Recommended citation: Alison E Obr, PhD, Alexander Lemenze, PhD, Krystopher Maingrette, MS, Virginia Ciliento, PhD, Yun-juan Chang, PhD, Joseph J Bulatowicz, MS, Teresa L Wood, PhD, A Frame-Shift for IGF-1R in Breast Cancer and Metastasis, Journal of the Endocrine Society, Volume 5, Issue Supplement_1, April-May 2021, Pages A1009–A1010, https://doi.org/10.1210/jendso/bvab048.2065 https://academic.oup.com/jes/article/5/Supplement_1/A1009/6239954
Published in PLoS ONE, 2021
Recommended citation: Sones JL, Yarborough CC, O’Besso V, Lemenze A, Douglas NC (2021) Genotypic analysis of the female BPH/5 mouse, a model of superimposed preeclampsia. PLoS ONE 16(7): e0253453. https://doi.org/10.1371/journal.pone.0253453 https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0253453
Published in Gastroenterology, 2021
Recommended citation: Hu MD, Golovchenko NB, Burns GL, Nair PM, Kelly TJ 4th, Agos J, Irani MZ, Soh WS, Zeglinski MR, Lemenze A, Bonder EM, Sandrock I, Prinz I, Granville DJ, Keely S, Watson AJM, Edelblum KL. γδ Intraepithelial Lymphocytes Facilitate Pathological Epithelial Cell Shedding Via CD103-Mediated Granzyme Release. Gastroenterology. 2021 Dec 1:S0016-5085(21)03804-X. doi: 10.1053/j.gastro.2021.11.028. Epub ahead of print. PMID: 34861219. https://www.gastrojournal.org/article/S0016-5085(21)03804-X/fulltext
Published in Cell Reports, 2022
Recommended citation: Fei Chen, Darine W. El-Naccache, John J. Ponessa, Alexander Lemenze, Vanessa Espinosa, Wenhui Wu, Katherine Lothstein, Linhua Jin, Olivia Antao, Jason S. Weinstein, Payal Damani-Yokota, Kamal Khanna, Peter J. Murray, Amariliz Rivera, Mark C. Siracusa, William C. Gause, Helminth resistance is mediated by differential activation of recruited monocyte-derived alveolar macrophages and arginine depletion, Cell Reports, Volume 38, Issue 2, 2022, 110215, ISSN 2211-1247, https://doi.org/10.1016/j.celrep.2021.110215. https://www.sciencedirect.com/science/article/pii/S2211124721017198
Published in Diagnostics, 2022
Recommended citation: Rossi M, Aspromonte SM, Kohlhapp FJ, Newman JH, Lemenze A, Pepe RJ, DeFina SM, Herzog NL, Donnelly R, Kuzel TM, Reiser J, Guevara-Patino JA, Zloza A. Gut Microbial Shifts Indicate Melanoma Presence and Bacterial Interactions in a Murine Model. Diagnostics. 2022; 12(4):958. https://doi.org/10.3390/diagnostics12040958 https://www.mdpi.com/2075-4418/12/4/958
Published in Mucosal Immunology, 2022
Recommended citation: Jia L, Wu G, Alonso S, Zhao C, Lemenze A, Lam YY, Zhao L, Edelblum KL. A transmissible γδ intraepithelial lymphocyte hyperproliferative phenotype is associated with the intestinal microbiota and confers protection against acute infection. Mucosal Immunol. 2022 May 19. doi: 10.1038/s41385-022-00522-x. PMID: 35589986. https://pubmed.ncbi.nlm.nih.gov/35589986/
Published in ACS Infectious Diseases, 2022
Recommended citation: Lemenze A, Mittal N, Perryman A, Daher S, Ekins S, Occi J, Ahn Y, Wang X, Russo R, Patel J, Daugherty R, Wood D, Connell N, Freundlich J. Rickettsia Aglow: A Fluorescence Assay and Machine Learning Model to Identify Inhibitors of Intracellular Infection. ACS Infectious Diseases. 2022; https://doi.org/10.1021/acsinfecdis.2c00014 https://pubs.acs.org/doi/10.1021/acsinfecdis.2c00014?ref=pdf
Published in Cell Reports, 2022
Recommended citation: El-Naccache D, Chen F, Palma M, Lemenze A, Fischer M, Wu W, Mishra P, Eltzschig H, Robson S, Virgilio F, Yap G, Edelblum K, Hasko G, Gause W. Adenosine metabolized from extracellular ATP promotes type 2 immunity through triggering A2BAR signaling in intestinal epithelial cells. Cell Reports. 2022; https://doi.org/10.1016/j.celrep.2022.111150 https://www.cell.com/cell-reports/fulltext/S2211-1247(22)00959-7?_returnURL=https%3A%2F%2Flinkinghub.elsevier.com%2Fretrieve%2Fpii%2FS2211124722009597%3Fshowall%3Dtrue
Published in Proceedings of the National Academy of Sciences, 2022
Recommended citation: Peng J, Sy CB, Ponessa JJ, Lemenze AD, Hernandez CM, Inclan-Rico JM, Siracusa MC (2022). Monocytes maintain central nervous system homeostasis following helminth-induced inflammation. Proceedings of the National Academy of Sciences, 119(37), e2201645119. doi:10.1073/pnas.2201645119 https://www.pnas.org/doi/10.1073/pnas.2201645119
Published in Science Immunology, 2022
Recommended citation: Fung H, Teryek M, Lemenze AD, Bergsbaken T (2022). CD103 fate mapping reveals that intestinal CD103 tissue-resident memory T cells are the primary responders to secondary infection. Science Immunology, 7(77):eabl9925. doi: 10.1126/sciimmunol.abl9925 https://www.science.org/doi/10.1126/sciimmunol.abl9925
Published in Nature Communications, 2022
Recommended citation: Chitale P, Lemenze AD, Fogarty EC, Shah A, Grady C, Odom-Mabey A, Johnson WE, Yang J, Eren AM, Brosch R, Kumar P, Alland D (2022). A comprehensive update to the Mycobacterium tuberculosis H37Rv reference genome. Nature Communications 13, 7068. doi:10.1038/s41467-022-34853-x https://www.nature.com/articles/s41467-022-34853-x
Published in Mucosal Immunology, 2023
Recommended citation: Helen Y. Fung, Angie M. Espinal, Matthew Teryek, Alexander D. Lemenze, Tessa Bergsbaken, STAT4 increases the phenotypic and functional heterogeneity of intestinal tissue-resident memory T cells, Mucosal Immunology, 2023. ISSN 1933-0219 https://doi.org/10.1016/j.mucimm.2023.03.002. https://www.sciencedirect.com/science/article/pii/S1933021923000168
Published in Reproduction, 2023
Recommended citation: Zhao Q, Larios K, Naaldijk Y, Sherman L, Chemerinski A, Okereke K, Rameshwar P, Lemenze A, Douglas NC, Morelli SS. Mesenchymal Stem Cell Secretome Alters Gene Expression and Upregulates Motility of Human Endometrial Stromal Cells. Reproduction. 2023 May 1:REP-22-0485. doi: 10.1530/REP-22-0485. PMID: 37252830. https://pubmed.ncbi.nlm.nih.gov/37252830/
Published in Fertility and Sterility, 2023
Recommended citation: N. Kalkota, A Lemenze, A Babwah, N Douglas, Endometrial Adhesion G Protein-Coupled Receptors are differentially expressed across the menstrual cycle and early mouse pregnancy, Fertility and Sterility, 2023. https://doi.org/10.1016/j.fertnstert.2023.05.113 https://www.fertstert.org/article/S0015-0282(23)00484-3/fulltext
Published in PNAS Nexus, 2023
Recommended citation: Xu C, Wang A, Ebraham L, Sullivan L, Tasker C, Pizutelli V, Couret J, Hernandez C, Kolli P, Deb PQ, Fritzky L, Subbian S, Gao N, Lo Y, Salvatore M, Rivera A, Lemenze A, Fitzgerald-Bocarsly P, Tyagi S, Lu W, Beaulieu A, Chang TL. Interferon ɛ restricts Zika virus infection in the female reproductive tract. PNAS Nexus. 2023 Oct 25;2(11):pgad350. doi: 10.1093/pnasnexus/pgad350. PMID: 37954158; PMCID: PMC10639110. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10639110/
Published in Europe PMC, 2023
Recommended citation: Eaton W, Hamilton D, Chen W, Lemenze A, Soteropoulos PP. Genetic identification of potential nodulating bacteria and nodule-associated bacteria (NAB) within root nodules of Inga punctata trees in a Costa Rican Cloud Forest. Research Square; 2023. DOI: 10.21203/rs.3.rs-3767521/v1. https://europepmc.org/article/ppr/ppr776791
Published in Restoration Ecology, 2024
Recommended citation: Eaton, W.D., Hamilton, D.A., Lemenze, A. and Soteropoulos, P. (2024), Natural regeneration or tree planting in a tropical forest-to-pasture damaged area: which is more efficacious for soil ecosystem recovery?. Restor Ecol e14127. https://doi.org/10.1111/rec.14127 https://onlinelibrary.wiley.com/doi/10.1111/rec.14127
Published in Human Reproduction, 2024
Recommended citation: Anat Chemerinski, May Shen, Nuriban Valero-Pacheco, Qingshi Zhao, Trystn Murphy, Lea George, Alex Lemenze, Lauren Sherman, Debra Heller, Xiaowei Chen, Tracy Wu, Peter G McGovern, Sara S Morelli, Ripla Arora, Aimee M Beaulieu, Nataki C Douglas, The impact of ovarian stimulation on the human endometrial microenvironment, Human Reproduction, 2024;, deae048, https://doi.org/10.1093/humrep/deae048 https://academic.oup.com/humrep/advance-article-abstract/doi/10.1093/humrep/deae048/7632816?redirectedFrom=fulltext
Published in AIMS Microbiology, 2024
Recommended citation: William D. Eaton, Debra A. Hamilton, Wen Chen, Alexander Lemenze, Patricia Soteropoulos. Use of high throughput DNA analysis to characterize the nodule-associated bacterial community from four ages of Inga punctata trees in a Costa Rican cloud forest[J]. AIMS Microbiology, 2024, 10(3): 572-595. doi: 10.3934/microbiol.2024027 https://www.aimspress.com/article/doi/10.3934/microbiol.2024027
Published in Cell Reports Medicine, 2024
Recommended citation: Hu WT, Kaluzova M, Dawson A, Sotelo V, Papas J, Lemenze A, Shu C, Jomartin M, Nayyar A, Hussain S. Clinical and CSF single-cell profiling of post-COVID-19 cognitive impairment. Cell Rep Med. 2024 May 21;5(5):101561. doi: 10.1016/j.xcrm.2024.101561. Epub 2024 May 13. PMID: 38744274; PMCID: PMC11148803. https://www.cell.com/cell-reports-medicine/fulltext/S2666-3791(24)00253-2
Published in Life Sci Alliance, 2024
Recommended citation: Lothstein KE, Chen F, Mishra P, Smyth DJ, Wu W, Lemenze A, Kumamoto Y, Maizels RM, Gause WC. Helminth protein enhances wound healing by inhibiting fibrosis and promoting tissue regeneration. Life Sci Alliance. 2024 Aug 23;7(11):e202302249. doi: 10.26508/lsa.202302249. PMID: 39179288; PMCID: PMC11342954. https://pubmed.ncbi.nlm.nih.gov/39179288/
Published:
Presentation as one of the Best Poster Award winners. Download here
Summer student research experience workshop, Online hosting, 2020
This was a brief 2 day workshop designed to provide baseline NGS/bioinformatics knowledge to students in the SSRP group. The workshop was presented with initial lectures, followed by an interactive RNA-seq experiment walkthrough.
Full course, Online hosting, 2020
The Bioinformatics of Genomics course is designed to be a fully guided course for baseline genomics analyses. The course will begin with basic introductions to Next Generation Sequencing (NGS), bioinformatics, and compute resources. Next it will delve into language specific training, and lastly review individual NGS analysis workflows. Each section will include at minimum a lecture, but will also have interactive Jupyter Notebooks for applicable code.